2024
M. Konca,
A. Lücking, and
A. Mehler
German SRL: Corpus Construction and Model Training
Proceedings of the 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation, ELRA Language Resources Association (ELRA) and the International Committee on Computational Linguistics (ICCL), 2024
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German SRL: Corpus Construction and Model Training
Proceedings of the 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation, ELRA Language Resources Association (ELRA) and the International Committee on Computational Linguistics (ICCL), 2024
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A. Lücking,
G. Abrami,
L. Hammerla,
M. Rahn,
D. Baumartz,
S. Eger, and
A. Mehler
Dependencies over Times and Tools (DoTT)
Proceedings of the 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation, 2024
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Dependencies over Times and Tools (DoTT)
Proceedings of the 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation, 2024
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2021
A. Pachzelt,
G. Kasperek,
A. Lücking,
G. Abrami, and
C. Driller
Semantic Search in Legacy Biodiversity Literature: Integrating data from different data infrastructures
Biodiversity Information Science and Standards, 5, e74251, 2021
URL, DOI, RIS, BibTex
Semantic Search in Legacy Biodiversity Literature: Integrating data from different data infrastructures
Biodiversity Information Science and Standards, 5, e74251, 2021
URL, DOI, RIS, BibTex
G. Abrami,
A. Henlein,
A. Lücking,
A. Kett,
P. Adeberg, and
A. Mehler
Unleashing annotations with TextAnnotator: Multimedia, multi-perspective document views for ubiquitous annotation
Proceedings of the Seventeenth Joint ACL - ISO Workshop on Interoperable Semantic Annotation (ISA-17), 2021
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Unleashing annotations with TextAnnotator: Multimedia, multi-perspective document views for ubiquitous annotation
Proceedings of the Seventeenth Joint ACL - ISO Workshop on Interoperable Semantic Annotation (ISA-17), 2021
URL, RIS, BibTex
A. Lücking,
C. Driller,
M. Stoeckel,
G. Abrami,
A. Pachzelt, and
A. Mehler
Multiple Annotation for Biodiversity: Developing an annotation framework among biology, linguistics and text technology
Language Resources and Evaluation (forthcoming), 2021
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Multiple Annotation for Biodiversity: Developing an annotation framework among biology, linguistics and text technology
Language Resources and Evaluation (forthcoming), 2021
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2020
C. Driller,
M. Koch,
G. Abrami,
W. Hemati,
A. Lücking,
A. Mehler,
A. Pachzelt, and
G. Kasperek
Fast and Easy Access to Central European Biodiversity Data with BIOfid
Biodiversity Information Science and Standards, 2020
DOI, RIS, BibTex
Fast and Easy Access to Central European Biodiversity Data with BIOfid
Biodiversity Information Science and Standards, 2020
DOI, RIS, BibTex
C. Driller,
M. Koch,
G. Abrami,
M. Stoeckel,
A. Pachzelt, and
G. Kasperek
Tracing back biodiversity to the 19th century via text mining
World Biodiversity Forum, Davos, Switzerland, February 23-28, 2020
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Tracing back biodiversity to the 19th century via text mining
World Biodiversity Forum, Davos, Switzerland, February 23-28, 2020
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C. Driller,
M. Koch,
G. Abrami,
M. Stoeckel,
A. Pachzelt, and
G. Kasperek
Mobilising Biodiversity Knowledge By Mining Heritage Literature
World Biodiversity Forum, Davos, Switzerland, February 23-28, 2020
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Mobilising Biodiversity Knowledge By Mining Heritage Literature
World Biodiversity Forum, Davos, Switzerland, February 23-28, 2020
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G. Abrami,
A. Mehler, and
M. Stoeckel
TextAnnotator: A web-based annotation suite for texts
Proceedings of the Digital Humanities 2020, 2020
URL, RIS, BibTex
TextAnnotator: A web-based annotation suite for texts
Proceedings of the Digital Humanities 2020, 2020
URL, RIS, BibTex
G. Abrami,
M. Stoeckel, and
A. Mehler
TextAnnotator: A UIMA based tool for simultaneous and collaborative annotation of texts
12th International Conference on Language Resources and Evaluation (LREC 2020), European Language Resources Association, 2020
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TextAnnotator: A UIMA based tool for simultaneous and collaborative annotation of texts
12th International Conference on Language Resources and Evaluation (LREC 2020), European Language Resources Association, 2020
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A. Henlein and
A. Mehler
On the Influence of Coreference Resolution on Word Embeddings in Lexical-semantic Evaluation Tasks
12th International Conference on Language Resources and Evaluation (LREC 2020), 2020
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On the Influence of Coreference Resolution on Word Embeddings in Lexical-semantic Evaluation Tasks
12th International Conference on Language Resources and Evaluation (LREC 2020), 2020
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J. Hildebrand,
W. Hemati, and
A. Mehler
Recognizing Sentence-level Logical Document Structures with the Help of Context-free Grammars
12th International Conference on Language Resources and Evaluation (LREC 2020), 2020
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Recognizing Sentence-level Logical Document Structures with the Help of Context-free Grammars
12th International Conference on Language Resources and Evaluation (LREC 2020), 2020
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M. Koch and
T. Hörnschemeyer
Biodiversity of the apterygote hexapods - a global assessment
26th International Congress of Entomology, Helsinki, Finland, July 19-24, 2020
URL, RIS, BibTex
Biodiversity of the apterygote hexapods - a global assessment
26th International Congress of Entomology, Helsinki, Finland, July 19-24, 2020
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2019
M. Stoeckel,
W. Hemati, and
A. Mehler
When Specialization Helps: Using Pooled Contextualized Embeddings to Detect Chemical and Biomedical Entities in Spanish
Proceedings of The 5th Workshop on BioNLP Open Shared Tasks, Association for Computational Linguistics, 2019
URL, DOI, RIS, BibTex
When Specialization Helps: Using Pooled Contextualized Embeddings to Detect Chemical and Biomedical Entities in Spanish
Proceedings of The 5th Workshop on BioNLP Open Shared Tasks, Association for Computational Linguistics, 2019
URL, DOI, RIS, BibTex
C. Driller,
G. Abrami,
M. Koch,
G. Kasperek,
A. Pachzelt, and
A. Mehler
Accessing knowledge from legacy biodiversity literature
Biodiversity Next, Leiden, Netherlands, October 22-25, 2019
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Accessing knowledge from legacy biodiversity literature
Biodiversity Next, Leiden, Netherlands, October 22-25, 2019
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M. Koch,
C. Driller,
I. Mikó, and
M. Yoder
Exploring biodiversity knowledge by ontologies
Biodiversity Next, Leiden, Netherlands, October 22-25, 2019
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Exploring biodiversity knowledge by ontologies
Biodiversity Next, Leiden, Netherlands, October 22-25, 2019
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C. Driller,
G. Abrami,
M. Stoeckel,
M. Koch, and
G. Kasperek
Tracing back biodiversity to the 19th century via text mining
49th Annual Meeting of the Ecological Society of Germany, Austria and Switzerland, Münster, Germany; September 9-13, 2019
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Tracing back biodiversity to the 19th century via text mining
49th Annual Meeting of the Ecological Society of Germany, Austria and Switzerland, Münster, Germany; September 9-13, 2019
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M. Koch,
C. Driller,
C. Weiland, and
T. Hörnschemeyer
Modern information technologies for the study of myriapod biodiversity
18th International Congress of Myriapodology, Budapest, Hungary, August 25-31, 2019
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Modern information technologies for the study of myriapod biodiversity
18th International Congress of Myriapodology, Budapest, Hungary, August 25-31, 2019
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G. Abrami,
A. Mehler,
A. Lücking,
E. Rieb, and
P. Helfrich
TextAnnotator: A flexible framework for semantic annotations
Proceedings of the Fifteenth Joint ACL - ISO Workshop on Interoperable Semantic Annotation, (ISA-15), 2019
URL, RIS, BibTex
TextAnnotator: A flexible framework for semantic annotations
Proceedings of the Fifteenth Joint ACL - ISO Workshop on Interoperable Semantic Annotation, (ISA-15), 2019
URL, RIS, BibTex
W. Hemati and
A. Mehler
CRFVoter: gene and protein related object recognition using a conglomerate of CRF-based tools
Journal of Cheminformatics, 11(1), 2019
URL, DOI, RIS, BibTex
CRFVoter: gene and protein related object recognition using a conglomerate of CRF-based tools
Journal of Cheminformatics, 11(1), 2019
URL, DOI, RIS, BibTex
W. Hemati and
A. Mehler
LSTMVoter: chemical named entity recognition using a conglomerate of sequence labeling tools
Journal of Cheminformatics, 11(1), 2019
URL, DOI, RIS, BibTex
LSTMVoter: chemical named entity recognition using a conglomerate of sequence labeling tools
Journal of Cheminformatics, 11(1), 2019
URL, DOI, RIS, BibTex
S. Ahmed,
M. Stoeckel,
C. Driller,
A. Pachzelt, and
A. Mehler
BIOfid Dataset: Publishing a German Gold Standard for Named Entity Recognition in Historical Biodiversity Literature
Proceedings of the 23rd Conference on Computational Natural Language Learning (CoNLL) (accepted), Association for Computational Linguistics, 2019
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BIOfid Dataset: Publishing a German Gold Standard for Named Entity Recognition in Historical Biodiversity Literature
Proceedings of the 23rd Conference on Computational Natural Language Learning (CoNLL) (accepted), Association for Computational Linguistics, 2019
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W. Hemati,
A. Mehler,
T. Uslu, and
G. Abrami
Der TextImager als Front- und Backend für das verteilte NLP von Big Digital Humanities Data
Proceedings of the 6th Digital Humanities Conference in the German-speaking Countries, DHd 2019, 2019
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Der TextImager als Front- und Backend für das verteilte NLP von Big Digital Humanities Data
Proceedings of the 6th Digital Humanities Conference in the German-speaking Countries, DHd 2019, 2019
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M. Stoeckel,
W. Hemati, and
A. Mehler
When Specialization Helps: Using Pooled Contextualized Embeddings to Detect Chemical and Biomedical Entities in Spanish
Proceedings of the International Workshop on BioNLP Open Shared Tasks (BioNLP-OST) 2019 (accepted), Association for Computational Linguistics SIGDAT and Asian Federation of Natural Language Processing, 2019
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When Specialization Helps: Using Pooled Contextualized Embeddings to Detect Chemical and Biomedical Entities in Spanish
Proceedings of the International Workshop on BioNLP Open Shared Tasks (BioNLP-OST) 2019 (accepted), Association for Computational Linguistics SIGDAT and Asian Federation of Natural Language Processing, 2019
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T. Uslu,
A. Mehler, and
D. Baumartz
Computing Classifier-based Embeddings with the Help of text2ddc
Proceedings of the 20th International Conference on Computational Linguistics and Intelligent Text Processing, (CICLing 2019), 2019
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Computing Classifier-based Embeddings with the Help of text2ddc
Proceedings of the 20th International Conference on Computational Linguistics and Intelligent Text Processing, (CICLing 2019), 2019
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T. Uslu,
A. Mehler,
C. Schulz, and
D. Baumartz
BigSense: a Word Sense Disambiguator for Big Data
Proceedings of the Digital Humanities 2019, (DH2019), 2019
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BigSense: a Word Sense Disambiguator for Big Data
Proceedings of the Digital Humanities 2019, (DH2019), 2019
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2018
G. Abrami,
A. Mehler,
P. Helfrich, and
E. Rieb
TextAnnotator: A Browser-based Framework for Annotating Textual Data in Digital Humanities
Proceedings of the Digital Humanities Austria 2018, 2018
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TextAnnotator: A Browser-based Framework for Annotating Textual Data in Digital Humanities
Proceedings of the Digital Humanities Austria 2018, 2018
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G. Abrami and
A. Mehler
A UIMA Database Interface for Managing NLP-related Text Annotations
Proceedings of the 11th edition of the Language Resources and Evaluation Conference, May 7 - 12, 2018
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A UIMA Database Interface for Managing NLP-related Text Annotations
Proceedings of the 11th edition of the Language Resources and Evaluation Conference, May 7 - 12, 2018
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S. Ahmed and
A. Mehler
Resource-Size matters: Improving Neural Named Entity Recognition with Optimized Large Corpora
Proceedings of the 17th IEEE International Conference on Machine Learning and Applications (ICMLA), 2018
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Resource-Size matters: Improving Neural Named Entity Recognition with Optimized Large Corpora
Proceedings of the 17th IEEE International Conference on Machine Learning and Applications (ICMLA), 2018
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D. Baumartz,
T. Uslu, and
A. Mehler
LTV: Labeled Topic Vector
Proceedings of {COLING 2018}, the 27th International Conference on Computational Linguistics: System Demonstrations, August 20-26, The COLING 2018 Organizing Committee, 2018
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LTV: Labeled Topic Vector
Proceedings of {COLING 2018}, the 27th International Conference on Computational Linguistics: System Demonstrations, August 20-26, The COLING 2018 Organizing Committee, 2018
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C. Driller,
M. Koch,
M. Schmidt,
C. Weiland,
T. Hörnschemeyer,
T. Hickler,
G. Abrami,
S. Ahmed,
et al.
Workflow and Current Achievements of BIOfid, an Information Service Mobilizing Biodiversity Data from Literature Sources
Biodiversity Information Science and Standards, 2, 2018
URL, DOI, RIS, BibTex
Workflow and Current Achievements of BIOfid, an Information Service Mobilizing Biodiversity Data from Literature Sources
Biodiversity Information Science and Standards, 2, 2018
URL, DOI, RIS, BibTex
P. Helfrich,
E. Rieb,
G. Abrami,
A. Lücking, and
A. Mehler
TreeAnnotator: Versatile Visual Annotation of Hierarchical Text Relations
Proceedings of the 11th edition of the Language Resources and Evaluation Conference, May 7 - 12, 2018
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TreeAnnotator: Versatile Visual Annotation of Hierarchical Text Relations
Proceedings of the 11th edition of the Language Resources and Evaluation Conference, May 7 - 12, 2018
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G. Kasperek and
M. Schmidt
A Specialised Information Service for Biodiversity Research, involving large-scale data mobilisation by mining German biodiversity literature
XIX International Botanical Congress (IBC2017), July 23-29, 2018
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A Specialised Information Service for Biodiversity Research, involving large-scale data mobilisation by mining German biodiversity literature
XIX International Botanical Congress (IBC2017), July 23-29, 2018
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A. Kett,
G. Abrami,
A. Mehler, and
C. Spiekermann
Resources2City Explorer: A System for Generating Interactive Walkable Virtual Cities out of File Systems
Proceedings of the 31st ACM User Interface Software and Technology Symposium, 2018
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Resources2City Explorer: A System for Generating Interactive Walkable Virtual Cities out of File Systems
Proceedings of the 31st ACM User Interface Software and Technology Symposium, 2018
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M. Koch,
C. Driller,
M. Schmidt,
T. Hörnschemeyer,
C. Weiland,
Miko I,
M. Yoder, and
T. Hickler
Current progress in the development of taxonomic and anatomical ontologies within the scope of BIOfid
Biodiversity Information Science and Standards, 2, 2018
URL, DOI, RIS, BibTex
Current progress in the development of taxonomic and anatomical ontologies within the scope of BIOfid
Biodiversity Information Science and Standards, 2, 2018
URL, DOI, RIS, BibTex
T. Uslu and
A. Mehler
PolyViz: a Visualization System for a Special Kind of Multipartite Graphs
Proceedings of the IEEE VIS 2018, 2018
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PolyViz: a Visualization System for a Special Kind of Multipartite Graphs
Proceedings of the IEEE VIS 2018, 2018
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T. Uslu,
A. Mehler,
D. Baumartz,
A. Henlein, and
W. Hemati
fastSense: An Efficient Word Sense Disambiguation Classifier
Proceedings of the 11th edition of the Language Resources and Evaluation Conference, May 7 - 12, 2018
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fastSense: An Efficient Word Sense Disambiguation Classifier
Proceedings of the 11th edition of the Language Resources and Evaluation Conference, May 7 - 12, 2018
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C. Weiland,
C. Driller,
M. Koch,
M. Schmidt,
G. Abrami,
S. Ahmed,
A. Mehler,
A. Pachzelt,
et al.
BioFID, a platform to enhance accessibility of biodiversity data
Proceedings of the 10th International Conference on Ecological Informatics, 2018
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BioFID, a platform to enhance accessibility of biodiversity data
Proceedings of the 10th International Conference on Ecological Informatics, 2018
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2017
W. Hemati,
A. Mehler, and
T. Uslu
CRFVoter: Chemical Entity Mention, Gene and Protein Related Object recognition using a conglomerate of CRF based tools
BioCreative V.5. Proceedings, 2017
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CRFVoter: Chemical Entity Mention, Gene and Protein Related Object recognition using a conglomerate of CRF based tools
BioCreative V.5. Proceedings, 2017
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M. Koch,
G. Kasperek,
T. Hörnschemeyer,
A. Mehler,
C. Weiland, and
A. Hausinger
Setup of BIOfid, a new Specialised Information Service for Biodiversity Research
Biodiversity Information Science and Standards, 1, 2017
URL, DOI, RIS, BibTex
Setup of BIOfid, a new Specialised Information Service for Biodiversity Research
Biodiversity Information Science and Standards, 1, 2017
URL, DOI, RIS, BibTex